Wednesday, March 20

ORFeome

Jerome Reboul: ORFeome 1.0

Philippe Vaglio: Worfdb

Philippe Vaglio: Naming problems

Philippe Lamesch: Improved Wormpep

Jean-Francois Rual: Problems of version 1.0

Jean-Francois Rual: Downstream of ORFeome

David Hill: Automation

David Hill: 2.0, 3.0, 4.0

Michael Brent: Using the C. briggsae genome to improve gene-structure prediction in C. elegans

Lynn Doucette-Stamm: Sequencing OSTs, ISTs, and other STs at GTC

Keynote I

Bob Strausberg: Navigating the Human Transcriptome

Thursday, March 21

New ORFeomes
Chair: Mike Brasch

Jon Chestnut: New Developments in Gateway Cloning: Getting In, Getting Around and Getting on With It

Mark Stapleton: Drosophila Gene Collection

Guillaume Cottarel: The yeast smORFeome

Xavier De Bolle: Brucella ORFeome

Pierre Hilson: ORFEUS or building a network for integrated ORFeome projects

Jim Hu: Searching for homotypic oligomerization in the E. coli orfeome

Claire Lurin: Functional analysis of Arabidopsis genes

Shuwei Yang: Genetic Hardware post Human Genome Project---Accurate ORFeomes

Downstream

Eric Chevet: Impact of RhoGTPases regulation on the early secretory pathway in C. elegans

Sander van den Heuvel: Cell cycle regulation

William Kaelin: Using genetics to select cancer drug targets

Pierre Hilson: ORFEUS or building a network for integrated ORFeome projects

Jim Hu: Searching for homotypic oligomerization in the E. coli orfeome

Claire Lurin: Functional analysis of Arabidopsis genes

Shuwei Yang: Genetic Hardware post Human Genome Project---Accurate ORFeomes

Afternoon session
Chair: Jim Hartley

Fabio Piano: Phenome

Marian Walhout: Germline maps

Barbara Conradt: Identification of transcriptional regulators of programmed cell death

Jason Pellettieri: Polarization of the C. elegans embryo-- an integrative approach

Pliny Smith: Identifying Pharynx Development Genes

Chris Armstrong: Pharynx maps and AD-ORFeome 1.0

Hui Ge: Chrom III map

Siming Li: The big map

Muneesh Tewari: Dauer maps

Nicolas Bertin: Interactome map

Todd Harris: WormBase, an integrated platform for functional genomics

Fritz Roth: Probabilistic Annotation and Protein Networks

Keynote 2

Arthur Pardee: Genomic Biology: Then & Now

Friday, March 21

Reverse proteomics
Chair: David Hill

Jim Hartley: Parallel protein expression

Jim Finley: Structural genomics of C. elegans: Automating protein expression analysis

Mike Yaffe: Phosphorylome

Sylvie Vincent: Use of lipidated-peptides as drug leads

Localizome

Justin Lamb: From expression profiles to transcription factors through promoter analysis

Bill Mohler: Virtual Worm

Mike Brasch: The Where, When, and With Whom of Protein Localization

Louis Leong: MultiSite Gateway

Denis Dupuy: Promoterome cloning

Marian Walhout: DNA/protein interaction mapping

Mark Gerstein: Analysis of Molecular Fossils:� Surveys of Pseudogenes in Eukaryotic Genomes